BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C07SP1|AL430514
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1830 0.0
>3x_Contig1789
Length = 30977
Score = 1830 bits (923), Expect = 0.0
Identities = 951/955 (99%), Gaps = 4/955 (0%)
Strand = Plus / Minus
Query: 1 taaaaccttataggctttctcgggcggttttatttgtttaataattattgctgttactac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13057 taaaaccttataggctttctcgggcggttttatttgtttaataattattgctgttactac 12998
Query: 61 cacttatcagatatctagtgtttgaagacttttcaatttgttattgagattccactttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12997 cacttatcagatatctagtgtttgaagacttttcaatttgttattgagattccactttga 12938
Query: 121 aggagaaattatcggatttgaaattgacaaaccattaaaaaaataaaaagctgcgaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12937 aggagaaattatcggatttgaaattgacaaaccattaaaaaaataaaaagctgcgaaata 12878
Query: 181 tgtctatctctgtgaaactagtggctgctgagtcattgaacaggagggatgtgtttagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12877 tgtctatctctgtgaaactagtggctgctgagtcattgaacaggagggatgtgtttagat 12818
Query: 241 ctcctgatccgtttgcagttttgactatcgatggttctcagacgaaatccacagcggctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12817 ctcctgatccgtttgcagttttgactatcgatggttctcagacgaaatccacagcggctg 12758
Query: 301 caaagaagacgttgaatccctactggaatgaagtatttcaattcaaaaatgtgagtgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12757 caaagaagacgttgaatccctactggaatgaagtatttcaattcaaaaatgtgagtgaaa 12698
Query: 361 attcgatcttaactgttcaagtgtttgatcagaaaaagttcaagaagaaagatcaagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12697 attcgatcttaactgttcaagtgtttgatcagaaaaagttcaagaagaaagatcaagggt 12638
Query: 421 tcctaggtgttgtcaacgttcgtattggtgacattctgggtcacttggacgaagatactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12637 tcctaggtgttgtcaacgttcgtattggtgacattctgggtcacttggacgaagatactg 12578
Query: 481 ccacttcgaacggtagagctcgtgaagagactattactagagatttaaaacgttctaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12577 ccacttcgaacggtagagctcgtgaagagactattactagagatttaaaacgttctaacg 12518
Query: 541 acgggttgtcagtaagtggtagaataatattggttttgacggttctccccagagctggca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12517 acgggttgtcagtaagtggtagaataatattggttttgacggttctccccagagctggca 12458
Query: 601 gccgtaatggagctgctggtgccgca-gtagtgctgttgctggttccggagcagctcgtc 659
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 12457 gccgtaatggagctgctggtgccgcaggtagtgctgttgctggttccggagcagctcgtc 12398
Query: 660 aatcggattcgatgacgaacgcttccactatcgacaacagattgattgctcagactgttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12397 aatcggattcgatgacgaacgcttccactatcgacaacagattgattgctcagactgttg 12338
Query: 720 ctaacaacttgcaaactactacattagacaaccaggattctgcgaatgctgcaggtaccg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12337 ctaacaacttgcaaactactacattagacaaccaggattctgcgaatgctgcaggtaccg 12278
Query: 780 ccagttcaggttcaggtgccggttcaagtgatgctgctccatccggtcaaccttcgacag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12277 ccagttcaggttcaggtgccggttcaagtgatgctgctccatccggtcaaccttcgacag 12218
Query: 840 ctcaatctcaatcgtcagctagcaggcaatactcatcgtttgaagatcaatatggtcgtt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12217 ctcaatctcaatcgtcagctagcaggcaatactcatcgtttgaagatcaatatggtcgtt 12158
Query: 900 ta-ccccaggatgggaaagaag-acggataactttggaag-acatattatgtgga 951
|| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 12157 tacccccaggatgggaaagaagaacggataactttggaagaacatattatgtgga 12103
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7539
Number of Sequences: 1807
Number of extensions: 7539
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)